Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P44143 Spenolimycin 346.1732 347.1809 129
P46495 Maximaisoflavone B 350.1150 351.1216 129
P47071 Chondramide A 646.3320 647.3399 129
P47983 697.4235 698.4278 129
P49645 Halistanol sulfate 688.2600 689.2620 129
P51555 5,7a-Dihydro-1,4,4,7a-tetramethyl-4H-indene 174.1404 175.1465 129
P54771 Inhibitor 50 435.0802 436.0893 129
P00240 Captopril-cysteine disulfide 336.0804 337.0872 128
P06891 2,5-Dimethylfuran 96.0572 97.0644 128
P07278 435.1175 436.1265 128

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 170
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 170
Glyma.14G198100 hypothetical protein NA 170
Glyma.15G107500 hypothetical protein NA 170
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 170
Glyma.05G233700 COL11 zinc finger protein CONSTANS-LIKE 16-like AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 169
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 168
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 168
Glyma.19G194300 Dt1 AT5G03840:TFL1:PEBP (phosphatidylethanolamine-binding protein) family protein 168
Glyma.19G194500 hypothetical protein AT2G36270:ABI5:Basic-leucine zipper (bZIP) transcription factor family protein 168