Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54929 1,3-Diisopropylbenzene 162.1388 163.1452 —
P54932 Punicatannin C 660.1684 661.1736 —
P54933 Hydroxyglimepiride 506.2176 507.2232 —
P54939 302.6174 303.6228 —
P54940 Diallyl hexasulfide 273.9157 274.9231 —
P54942 Darapladib 666.2701 667.2786 —
P54943 Stellettin H 508.3192 509.3291 —
P54944 Boceprevir 519.3457 520.3517 —
P54946 DL-Methionine-4-antipyrineamide 334.1464 335.1552 —
P54949 335.1497 336.1575 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G124700 hypothetical protein NA 2,364
Glyma.08G123500 hypothetical protein NA 2,347
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2,327
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2,309
Glyma.08G122500 hypothetical protein NA 2,303
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 2,290
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 2,276
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2,254
Glyma.19G027000 hypothetical protein NA 2,247
Glyma.14G149300 hypothetical protein NA 2,225