Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P22338 (5S)-5-(7-Benzofuranyl)-8-chloro-3-methyl-1,2,4,5-tetrahydro-3-benzazepin-7-ol 327.1038 328.1106 113
P23965 327.2842 328.2896 113
P25505 Dracotanoside A 833.3882 834.3987 113
P27623 2,5-Diisopropyl-3-methylphenol 192.1485 193.1565 113
P28533 Ageratoside B1 988.4882 989.4915 113
P30593 GS-3 388.1637 389.1735 113
P32448 allo-Aromadendrane-10beta,14-diol 238.1913 239.1982 113
P34376 (E,E)-Geranyllinalool 290.2574 291.2657 113
P35307 Neoazedarachin A 616.3002 617.3063 113
P37634 Gualamycin 590.2188 591.2297 113

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G124700 hypothetical protein NA 2,364
Glyma.08G123500 hypothetical protein NA 2,347
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2,327
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2,309
Glyma.08G122500 hypothetical protein NA 2,303
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 2,290
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 2,276
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2,254
Glyma.19G027000 hypothetical protein NA 2,247
Glyma.14G149300 hypothetical protein NA 2,225