Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P24109 3beta-Sulfooxy-7beta-N-acetylglucosaminylchol-5-en-24-oyltaurine 782.2913 783.3012 124
P24278 Aknadicine 345.1608 346.1691 124
P25509 Petunoside 786.2037 787.2111 124
P28666 11-Hydroxyaclacinomycin X 840.3304 841.3421 124
P29891 Ustilipid C 634.3999 635.4102 124
P30850 387.7083 388.7173 124
P32406 Amritoside B 588.2412 589.2511 124
P33884 Stephalonine G 541.2389 542.2484 124
P36856 920.2028 921.2079 124
P37516 Hoffmanniolide 878.4295 879.4342 124

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.05G124700 hypothetical protein NA 2,364
Glyma.08G123500 hypothetical protein NA 2,347
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2,327
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2,309
Glyma.08G122500 hypothetical protein NA 2,303
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 2,290
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 2,276
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2,254
Glyma.19G027000 hypothetical protein NA 2,247
Glyma.14G149300 hypothetical protein NA 2,225