Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09654 2-Hydroxyfelbamate 254.0901 255.0955 141
P16359 197.1097 198.1162 141
P17680 Glycosmisic acid 372.1197 373.1259 141
P21082 (2S)-2-Amino-4-sulfanylbutanal 119.0422 120.0490 141
P26911 1-(9Z-octadecenoyl)-2-(4,7-dioxo-5E-heptenoyl)-sn-glycero-3-phospho-(1'-myo-inositol) 736.3391 737.3480 141
P27176 FD 212 268.1287 269.1370 141
P27832 Mabiogenin 3-[rhamnosyl-(1->6)-glucoside] 796.4504 797.4579 141
P29828 4'-Oxonebramine 304.1730 305.1785 141
P32281 Aristolindiquinone 218.0561 219.0635 141
P37322 7beta-ethynyl-4a,5,6,7,8,8abeta-Hexahydro-1alpha-hydroxy-1,4ab-dimethyl-2(1H)-naphthalenone 218.1294 219.1361 141

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G049000 hypothetical protein NA 176
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 176
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 176
Glyma.09G056300 hypothetical protein NA 175
Glyma.11G118200 hypothetical protein NA 175
Glyma.19G125400 hypothetical protein AT3G12390:AT3G12390:Nascent polypeptide-associated complex (NAC), alpha subunit family protein 174
Glyma.08G296900 hypothetical protein NA 172
Glyma.15G139000 hypothetical protein NA 172
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 171
Glyma.20G217700 hypothetical protein AT1G32810:AT1G32810:RING/FYVE/PHD zinc finger superfamily protein 171