Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54929 1,3-Diisopropylbenzene 162.1388 163.1452 —
P54932 Punicatannin C 660.1684 661.1736 —
P54933 Hydroxyglimepiride 506.2176 507.2232 —
P54939 302.6174 303.6228 —
P54940 Diallyl hexasulfide 273.9157 274.9231 —
P54942 Darapladib 666.2701 667.2786 —
P54943 Stellettin H 508.3192 509.3291 —
P54944 Boceprevir 519.3457 520.3517 —
P54946 DL-Methionine-4-antipyrineamide 334.1464 335.1552 —
P54949 335.1497 336.1575 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G049000 hypothetical protein NA 176
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 176
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 176
Glyma.09G056300 hypothetical protein NA 175
Glyma.11G118200 hypothetical protein NA 175
Glyma.19G125400 hypothetical protein AT3G12390:AT3G12390:Nascent polypeptide-associated complex (NAC), alpha subunit family protein 174
Glyma.08G296900 hypothetical protein NA 172
Glyma.15G139000 hypothetical protein NA 172
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 171
Glyma.20G217700 hypothetical protein AT1G32810:AT1G32810:RING/FYVE/PHD zinc finger superfamily protein 171