Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P07122 p-Coumaroyl-malic acid 280.0568 281.0648 170
P15887 Tiagabine 375.1341 376.1391 170
P22733 9R-hydroxy-2S,8S-dimethyl-3-oxo-2E,4E-undecadienoic acid 240.1333 241.1401 170
P32315 839.3560 840.3653 170
P35427 690.1372 691.1470 170
P44438 Benzenepropanoic acid, 4-hydroxy-alpha-(2-((3-(hydroxyamino)-3-oxo-1-(phenylmethyl)propyl)amino)-2-oxoethyl)-3-iodo- 526.0601 527.0660 170
P49144 d-Phenylalanyl-l-prolyl-l-arginyl-chloromethyl ketone 926.4041 927.4114 170
P08848 594.1727 595.1810 169
P09434 2-(3,4-Dihydro-2,2-dimethyl-6-nitro-2H-1,4-benzoxazin-4-yl)pyridine N-oxide 301.1057 302.1136 169
P09532 Guangsangon M 610.1807 611.1855 169

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.15G049000 hypothetical protein NA 176
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 176
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 176
Glyma.09G056300 hypothetical protein NA 175
Glyma.11G118200 hypothetical protein NA 175
Glyma.19G125400 hypothetical protein AT3G12390:AT3G12390:Nascent polypeptide-associated complex (NAC), alpha subunit family protein 174
Glyma.08G296900 hypothetical protein NA 172
Glyma.15G139000 hypothetical protein NA 172
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 171
Glyma.20G217700 hypothetical protein AT1G32810:AT1G32810:RING/FYVE/PHD zinc finger superfamily protein 171