Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06381 6',7'-Dihydroxybergamottin 372.1547 373.1621 162
P06792 Myo-inositol glutamate 323.0859 324.0925 162
P10166 Demeton-O 258.0513 259.0583 162
P11723 Isomagnolol 266.1356 267.1438 162
P14158 Physalien 650.1559 651.1582 162
P21337 3-(9-Adeninyl)propionic acid. 207.0794 208.0868 162
P32513 Cefbuperazone 627.1640 628.1696 162
P41353 Deoxyharringtonine 515.2462 516.2526 162
P41829 Renieramycin R 605.2383 606.2458 162
P49182 Noberastine 311.1785 312.1827 162

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.13G135100 hypothetical protein AT5G02750:SGR9:RING/U-box superfamily protein 180
Glyma.13G237900 hypothetical protein NA 180
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 179
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreductase family protein 179
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 178
Glyma.09G057000 hypothetical protein NA 178
Glyma.11G237700 hypothetical protein NA 178
Glyma.14G190300 hypothetical protein AT2G04240:XERICO:RING/U-box superfamily protein 178
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 178
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 178