Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P40427 Anzuroside 640.3421 641.3485 112
P41440 Thuja-2,4[10]-diene 134.1087 135.1156 112
P43015 Robustaflavone 7''-methyl ether 552.1039 553.1093 112
P46641 1-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 830.4901 831.4964 112
P47211 [4-((1Z)-2-(Acetylamino)-3-{[1-(1,1'-biphenyl-4-ylmethyl)-2-oxoazepan-3-YL]amino}-3-oxoprop-1-enyl)-2-formylphenyl]acetic acid 567.2412 568.2503 112
P48131 Herbarumin II 244.1302 245.1383 112
P49348 Tirandamycin C 387.2085 388.2183 112
P50908 670.3678 671.3788 112
P50943 Chilocorine A 390.2704 391.2767 112
P04365 Monascorubramine 381.1953 382.2017 111

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.18G201900 hypothetical protein NA 183
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 182
Glyma.08G226000 hypothetical protein AT3G13062:AT3G13062:Polyketide cyclase/dehydrase and lipid transport superfamily protein 182
Glyma.08G226100 hypothetical protein AT3G13060:ECT5:evolutionarily conserved C-terminal region 5 182
Glyma.08G226400 hypothetical protein AT3G13050:NiaP:Major facilitator superfamily protein 182
Glyma.16G189500 hypothetical protein NA 182
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 181
Glyma.14G190400 hypothetical protein AT3G07650:COL9:CONSTANS-like 9 181
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 181
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 180