Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02131 Eustifoline D 221.0836 222.0913 182
P24545 5-Methoxy-3,4-methylenedioxyamphetamine 209.1042 210.1126 182
P37572 28-Glucosyloleanolic acid 3-[rhamnosyl-(1->2)-galactosyl-(1->3)-glucuronide] 1116.5415 1117.5463 182
P43306 102.0458 103.0535 182
P05454 Leonuriside A 332.1106 333.1163 181
P06475 (+)-5,17-Dehydromatrine N-oxide 262.1661 263.1722 181
P16872 Methyl-4-O-caffeoylquinate 368.1086 369.1180 181
P21471 Illifunone C 252.1331 253.1413 181
P33036 1,5-Dihydro-7-(1-piperidinyl)-imidazo(2,1-b)quinazolin-2(3H)-one 270.1495 271.1555 181
P52796 Famprofazone 377.2443 378.2528 181

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G149500 hypothetical protein NA 190
Glyma.16G111800 hypothetical protein AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein 189
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 188
Glyma.16G105700 hypothetical protein NA 187
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 186
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 185
Glyma.16G041700 hypothetical protein AT1G64770:PnsB2:NDH-dependent cyclic electron flow 1 185
Glyma.16G105800 hypothetical protein NA 185
Glyma.16G157200 hypothetical protein AT1G71850:AT1G71850:Ubiquitin carboxyl-terminal hydrolase family protein 185
Glyma.18G194900 hypothetical protein NA 184