Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11240 6-Benzylaminopurine 225.1038 226.1090 123
P15609 2-Isopropylfuran 110.0718 111.0795 123
P15845 Nigrospoxydon C 294.0747 295.0816 123
P17541 17-Ethynyl-16-fluoroestradiol 314.1689 315.1765 123
P17713 939.2673 940.2706 123
P20071 Melochinone 331.1571 332.1663 123
P26120 1,2-dinonanoyl-sn-glycero-3-phosphocholine 537.3455 538.3528 123
P30440 2-Isopropylfuran 110.0717 111.0792 123
P32052 Zanamivir 332.1327 333.1402 123
P33021 7-O-Methyl-N-deacetylipecoside 535.2335 536.2382 123

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G149500 hypothetical protein NA 190
Glyma.16G111800 hypothetical protein AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein 189
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 188
Glyma.16G105700 hypothetical protein NA 187
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 186
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 185
Glyma.16G041700 hypothetical protein AT1G64770:PnsB2:NDH-dependent cyclic electron flow 1 185
Glyma.16G105800 hypothetical protein NA 185
Glyma.16G157200 hypothetical protein AT1G71850:AT1G71850:Ubiquitin carboxyl-terminal hydrolase family protein 185
Glyma.18G194900 hypothetical protein NA 184