Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P06381 6',7'-Dihydroxybergamottin 372.1547 373.1621 162
P06792 Myo-inositol glutamate 323.0859 324.0925 162
P10166 Demeton-O 258.0513 259.0583 162
P11723 Isomagnolol 266.1356 267.1438 162
P14158 Physalien 650.1559 651.1582 162
P21337 3-(9-Adeninyl)propionic acid. 207.0794 208.0868 162
P32513 Cefbuperazone 627.1640 628.1696 162
P41353 Deoxyharringtonine 515.2462 516.2526 162
P41829 Renieramycin R 605.2383 606.2458 162
P49182 Noberastine 311.1785 312.1827 162

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 194
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 194
Glyma.14G171400 hypothetical protein NA 193
Glyma.16G106200 hypothetical protein NA 193
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 193
Glyma.05G220900 hypothetical protein NA 192
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 192
Glyma.15G048200 hypothetical protein AT1G25260:AT1G25260:Ribosomal protein L10 family protein 192
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 192
Glyma.12G212800 hypothetical protein NA 191