Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P08409 Hydroxydesmthyl doxepin glucuronide 471.1930 472.1991 113
P09805 ES 242-1 604.2235 605.2299 113
P11463 5-Megastigmen-7-yne-3,9-diol 9-glucoside 370.1959 371.2038 113
P12004 N-(1-Deoxy-1-fructosyl)tyrosine 343.1239 344.1305 113
P12768 883.3117 884.3193 113
P18966 Notoamide H 479.2104 480.2136 113
P19107 862.2377 863.2433 113
P20003 14,15-Dihydroxygelsenicine 358.1544 359.1638 113
P20634 Euphoscopin F 538.2526 539.2633 113
P22004 (E)-2-Tridecene-4,6,8-triyn-1-ol 186.1055 187.1138 113

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 194
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 194
Glyma.14G171400 hypothetical protein NA 193
Glyma.16G106200 hypothetical protein NA 193
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 193
Glyma.05G220900 hypothetical protein NA 192
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 192
Glyma.15G048200 hypothetical protein AT1G25260:AT1G25260:Ribosomal protein L10 family protein 192
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 192
Glyma.12G212800 hypothetical protein NA 191