Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P16525 Isoginkgetin 7-O-beta-D-glucopyranoside 728.1731 729.1824 115
P19420 Homoneoharringtonine 549.2405 550.2453 115
P19653 750.2553 751.2633 115
P19780 Lappaol D 568.2302 569.2391 115
P20216 Histidylhistidine 292.1273 293.1352 115
P21207 Dapriamicin A 511.1949 512.2013 115
P22565 Androstane-3,17-diol 17-sulfate 372.1984 373.2057 115
P22629 N-4-[2(R)-Amino-3-mercaptopropyl]amino-2-naphthylbenzoyl-(L)-leucine, TFA 465.2079 466.2159 115
P22895 FD 212 268.1299 269.1362 115
P23137 Fentrazamide 349.1306 350.1360 115

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 194
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 194
Glyma.14G171400 hypothetical protein NA 193
Glyma.16G106200 hypothetical protein NA 193
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 193
Glyma.05G220900 hypothetical protein NA 192
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 192
Glyma.15G048200 hypothetical protein AT1G25260:AT1G25260:Ribosomal protein L10 family protein 192
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 192
Glyma.12G212800 hypothetical protein NA 191