Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55217 Cryptophycin 52 668.2910 669.3012 —
P55219 Anadur 506.3390 507.3476 —
P55221 609.0220 610.0260 —
P55224 Hicksoane C 608.0116 609.0195 —
P55225 Haloxyline B 435.3725 436.3803 —
P55226 690.1733 691.1811 —
P55227 Pectenol A 582.4057 583.4119 —
P55228 609.6882 610.6931 —
P55232 609.7950 610.7988 —
P55233 667.3010 668.3098 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 196
Glyma.07G078300 hypothetical protein NA 196
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 196
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 196
Glyma.18G231500 hypothetical protein NA 196
Glyma.19G125800 hypothetical protein AT2G40840:DPE2:disproportionating enzyme 2 196
Glyma.08G109000 SUB1 NA 195
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 195
Glyma.19G188200 hypothetical protein NA 195
Glyma.01G037200 hypothetical protein NA 194