Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P19549 Difloxacin 399.1411 400.1484 192
P21953 Nordenletin 556.2090 557.2123 192
P25017 CDP-DG(20:1(11Z)/TXB2) 1121.5707 1122.5740 192
P25100 762.2022 763.2058 192
P26566 703.2717 704.2750 192
P32490 Juncin K 706.3299 707.3398 192
P34067 2-[5-Methoxy-2-methyl-1-[(4-methylsulfanylphenyl)methyl]indol-3-yl]propanoic acid 369.1393 370.1469 192
P35251 Mycothiazole-4,19-diol 438.2197 439.2304 192
P41427 Cadensin B 482.1216 483.1254 192
P42403 Artomunoxanthentrione epoxide 462.1286 463.1370 192

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 196
Glyma.07G078300 hypothetical protein NA 196
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 196
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 196
Glyma.18G231500 hypothetical protein NA 196
Glyma.19G125800 hypothetical protein AT2G40840:DPE2:disproportionating enzyme 2 196
Glyma.08G109000 SUB1 NA 195
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 195
Glyma.19G188200 hypothetical protein NA 195
Glyma.01G037200 hypothetical protein NA 194