Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P18539 | 5-Methoxy-8,8-dimethyl-10-(3',7'-dimethylocta-1',6'-dien-3'-yl)-2H,8H,benzo[1,2-b:5,4-b']dipyran-2-one | 394.2146 | 395.2222 | 136 |
| P27982 | Lamiuside D | 816.2749 | 817.2832 | 136 |
| P29257 | 9R-hydroxy-2S,8S-dimethyl-3-oxo-2E,4E-undecadienoic acid | 240.1363 | 241.1427 | 136 |
| P32748 | R-30-hydroxygambogic acid | 644.3018 | 645.3070 | 136 |
| P33955 | Bernardioside B2 | 958.5145 | 959.5170 | 136 |
| P34540 | 631.7998 | 632.8043 | 136 | |
| P40186 | Nigakilactone E | 450.2230 | 451.2299 | 136 |
| P42246 | 1097.0166 | 1098.0239 | 136 | |
| P46622 | 816.3538 | 817.3660 | 136 | |
| P07903 | Coptisine | 319.0848 | 320.0900 | 135 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.11G119600 | hypothetical protein | AT2G16130:PMT2:polyol/monosaccharide transporter 2 | 202 | |
| Glyma.15G048800 | hypothetical protein | AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family | 202 | |
| Glyma.09G019300 | hypothetical protein | AT1G52520:FRS6:FAR1-related sequence 6 | 200 | |
| Glyma.12G001400 | hypothetical protein | AT1G72090:AT1G72090:Methylthiotransferase | 200 | |
| Glyma.12G001600 | PM27 | seed maturation protein PM27 | AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant domain-containing protein / LEA domain-containing protein | 200 |
| Glyma.12G001700 | hypothetical protein | AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein | 200 | |
| Glyma.05G182500 | hypothetical protein | AT5G65210:TGA1:bZIP transcription factor family protein | 199 | |
| Glyma.09G238800 | hypothetical protein | AT3G28910:MYB30:myb domain protein 30 | 199 | |
| Glyma.14G044000 | hypothetical protein | AT5G62290:AT5G62290:nucleotide-sensitive chloride conductance regulator (ICln) family protein | 198 | |
| Glyma.17G218800 | Peptidyl-prolyl cis-trans isomerase CYP57 | AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | 197 |