Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P09995 Daphniyunnine D 341.2004 342.2073 167
P10528 Etoperidone 377.1934 378.2001 167
P18446 1080.3689 1081.3767 167
P22504 Swietenidin B 205.0736 206.0805 167
P30111 Trifoliolasine D 783.2994 784.3081 167
P30296 1006.3388 1007.3447 167
P35381 898.3478 899.3586 167
P38138 Semapimod 744.4382 745.4471 167
P41379 11-Hydroxy-9-tridecenoic acid 228.1769 229.1859 167
P43251 Auriculatin 420.1577 421.1647 167

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 203
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 203
Glyma.16G138900 hypothetical protein NA 203
Glyma.18G091600 hypothetical protein NA 203
Glyma.18G242900 hypothetical protein NA 203
Glyma.19G125300 hypothetical protein AT3G56880:AT3G56880:VQ motif-containing protein__AT2G41010:CAMBP25:calmodulin (CAM)-binding protein of 25 kDa 203
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 202
Glyma.03G136100 hypothetical protein NA 202
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 202
Glyma.11G061800 hypothetical protein NA 202