Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55367 157.9660 158.9738 —
P55373 625.1241 626.1300 —
P55374 Pyridomacrolidin 581.2199 582.2304 —
P55377 607.8877 608.8918 —
P55379 Pre-alcaligin 422.2002 423.2039 —
P55381 Hydroxynybomycin 314.0896 315.0962 —
P55383 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1080 503.1150 —
P55387 257.9007 258.9083 —
P55389 (4R)-4-Hydroxyipecoside 581.2079 582.2145 —
P55390 Withaperuvin H 578.2554 579.2585 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G014600 hypothetical protein NA 206
Glyma.11G070700 hypothetical protein NA 206
Glyma.18G100300 hypothetical protein NA 206
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 205
Glyma.17G251800 hypothetical protein NA 205
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 205
Glyma.01G034300 hypothetical protein NA 204
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 204
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 204
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 204