Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55049 Xylaroside B 328.1519 329.1600 —
P55052 284.2780 285.2841 —
P55053 600.7683 601.7714 —
P55057 Cephasugine 347.1721 348.1791 —
P55059 3-Methylnonanoylcarnitine 315.2432 316.2523 —
P55060 265.1400 266.1458 —
P55061 3Z,6Z,9Z-Octadecatriene 248.2467 249.2551 —
P55062 ES 242-1 604.2300 605.2419 —
P55063 Nandrolone phenpropionate 406.2498 407.2583 —
P55064 Yuccaol A 496.1147 497.1224 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G014600 hypothetical protein NA 206
Glyma.11G070700 hypothetical protein NA 206
Glyma.18G100300 hypothetical protein NA 206
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 205
Glyma.17G251800 hypothetical protein NA 205
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 205
Glyma.01G034300 hypothetical protein NA 204
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 204
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 204
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 204