Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54929 1,3-Diisopropylbenzene 162.1388 163.1452 —
P54932 Punicatannin C 660.1684 661.1736 —
P54933 Hydroxyglimepiride 506.2176 507.2232 —
P54939 302.6174 303.6228 —
P54940 Diallyl hexasulfide 273.9157 274.9231 —
P54942 Darapladib 666.2701 667.2786 —
P54943 Stellettin H 508.3192 509.3291 —
P54944 Boceprevir 519.3457 520.3517 —
P54946 DL-Methionine-4-antipyrineamide 334.1464 335.1552 —
P54949 335.1497 336.1575 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.04G014600 hypothetical protein NA 206
Glyma.11G070700 hypothetical protein NA 206
Glyma.18G100300 hypothetical protein NA 206
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 205
Glyma.17G251800 hypothetical protein NA 205
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 205
Glyma.01G034300 hypothetical protein NA 204
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 204
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 204
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 204