Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55235 607.8970 608.9062 —
P55236 Norhygrine 127.0985 128.1063 —
P55237 Briaexcavatolide K 584.2479 585.2553 —
P55238 607.9278 608.9337 —
P55239 609.5829 610.5918 —
P55243 607.9804 608.9906 —
P55244 Beilschmieflavonoid A 614.2514 615.2599 —
P55246 Dicerandrol A 666.1878 667.1909 —
P55247 609.5259 610.5340 —
P55248 Ilmofosine 525.3701 526.3741 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 213
Glyma.03G136000 hypothetical protein NA 211
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 211
Glyma.13G224800 hypothetical protein NA 210
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 208
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 208
Glyma.12G054500 hypothetical protein NA 208
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 207
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 206
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 206