Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P10446 Euchrenone a14 472.2284 473.2320 168
P13647 982.2182 983.2289 168
P13935 Malvidin 3-glucoside-5-(6-acetylglucoside) 698.1805 699.1815 168
P19115 Israpafant 488.1842 489.1914 168
P22796 Argylioside 704.2463 705.2566 168
P33387 Altretamine 210.1598 211.1668 168
P37674 Blebbistatin 292.1218 293.1314 168
P42321 N3-Cyclopropyl-7-[(4-propan-2-ylphenyl)methyl]pyrrolo[3,2-f]quinazoline-1,3-diamine 371.2129 743.4342 168
P45697 Cadalene 198.1396 199.1481 168
P06307 915.2578 916.2666 167

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 213
Glyma.03G136000 hypothetical protein NA 211
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 211
Glyma.13G224800 hypothetical protein NA 210
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 208
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 208
Glyma.12G054500 hypothetical protein NA 208
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 207
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 206
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 206