Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11356 6-O-Acetylscutehenanine A 495.2297 496.2346 118
P14899 Mopidralazine 273.1588 274.1671 118
P15486 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1086 503.1184 118
P15867 Symlandine 381.2110 382.2174 118
P15915 Methionine sulfone 181.0438 182.0519 118
P17609 N,N-Didesmethyltramadol 235.1563 236.1631 118
P20973 SB 243213 428.1449 429.1530 118
P28706 Stemphyloxin I 382.2320 383.2393 118
P29385 Acarbose 645.2529 646.2627 118
P29481 TRIPARANOL 437.2060 438.2140 118

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 213
Glyma.03G136000 hypothetical protein NA 211
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 211
Glyma.13G224800 hypothetical protein NA 210
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 208
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 208
Glyma.12G054500 hypothetical protein NA 208
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 207
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 206
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 206