Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P11441 Fura-2 641.1570 642.1631 130
P16502 Aristolindiquinone 218.0576 219.0642 130
P20755 Neo-S-petasin 334.1597 335.1664 130
P20905 787.3606 788.3693 130
P23214 Robustaflavone 7''-methyl ether 552.1063 553.1134 130
P23422 Tryptophol [xylosyl-(1->6)-glucoside] 455.1791 456.1854 130
P28058 Huperzine T 277.1650 278.1731 130
P30000 N-(1-methyl-2-hydroxy-2-phenyl-ethyl)-5Z,8Z,11Z,14Z-eicosatetraenoyl amine 437.3308 438.3417 130
P31683 105.0290 106.0365 130
P32485 Dichotosinin 478.1811 479.1865 130

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 213
Glyma.03G136000 hypothetical protein NA 211
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 211
Glyma.13G224800 hypothetical protein NA 210
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 208
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 208
Glyma.12G054500 hypothetical protein NA 208
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 207
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 206
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 206