Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54862 605.8809 606.8893 —
P54863 605.7784 606.7828 —
P54866 LY201116 240.1275 241.1348 —
P54869 671.1572 672.1693 —
P54870 2-Isopropylfuran 110.0722 221.1514 —
P54871 Candesartan cilexetil 610.2520 611.2601 —
P54872 Kadsurenin B 342.1516 343.1605 —
P54873 689.1570 690.1664 —
P54874 606.9143 607.9211 —
P54875 Orthosiphol L 692.2803 693.2898 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 2,601
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 2,572
Glyma.05G224700 hypothetical protein NA 2,568
Glyma.14G201600 hypothetical protein NA 2,551
Glyma.14G201700 hypothetical protein NA 2,549
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 2,512
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 2,473
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2,457
Glyma.13G134300 hypothetical protein NA 2,455
Glyma.08G122200 hypothetical protein NA 2,451