Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P54589 | Samarcandone | 398.2055 | 399.2156 | — |
| P54594 | 4,4,6,6-Tetramethyl-bicyclo[3.1.0]hex-2-ene | 136.1233 | 137.1308 | — |
| P54595 | Antibiotic XK 88-5 | 450.2816 | 451.2857 | — |
| P54607 | 205.6176 | 206.6250 | — | |
| P54609 | 16-(3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-2E-hexadecenoic acid | 400.2791 | 401.2866 | — |
| P54612 | 10-Hydroxy-cadin-4-en-3-one | 236.1733 | 473.3550 | — |
| P54614 | Stearidonoyl-[glycerolipid] | 260.2107 | 261.2168 | — |
| P54620 | 1-Dehydroxybaccatin VI | 698.3043 | 699.3069 | — |
| P54624 | 3-O-alpha-L-rhamnopyranosyl-3-hydroxytetradecanoyl-3-hydroxydecanoic acid | 560.3963 | 561.4070 | — |
| P54630 | 119.9575 | 120.9646 | — |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 2,601 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 2,572 | |
| Glyma.05G224700 | hypothetical protein | NA | 2,568 | |
| Glyma.14G201600 | hypothetical protein | NA | 2,551 | |
| Glyma.14G201700 | hypothetical protein | NA | 2,549 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 2,512 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 2,473 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 2,457 | |
| Glyma.13G134300 | hypothetical protein | NA | 2,455 | |
| Glyma.08G122200 | hypothetical protein | NA | 2,451 |