Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P54104 | 3-Deoxyestrone | 254.1632 | 255.1704 | — |
| P54106 | 432.7419 | 433.7480 | — | |
| P54111 | 9R-hydroxy-2E,4E-decadienoic acid | 184.1093 | 185.1159 | — |
| P54112 | 352.8207 | 353.8284 | — | |
| P54114 | 180.9669 | 181.9745 | — | |
| P54116 | 356.8340 | 357.8414 | — | |
| P54117 | Chlovalicin | 332.1393 | 333.1472 | — |
| P54119 | Litsenolide C1 | 310.2467 | 311.2532 | — |
| P54121 | 6-O-Glc-paromamine | 485.2244 | 486.2324 | — |
| P54125 | Agrimol F | 640.2606 | 641.2687 | — |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 2,601 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 2,572 | |
| Glyma.05G224700 | hypothetical protein | NA | 2,568 | |
| Glyma.14G201600 | hypothetical protein | NA | 2,551 | |
| Glyma.14G201700 | hypothetical protein | NA | 2,549 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 2,512 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 2,473 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 2,457 | |
| Glyma.13G134300 | hypothetical protein | NA | 2,455 | |
| Glyma.08G122200 | hypothetical protein | NA | 2,451 |