Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P45656 Aglain B 630.2840 631.2925 117
P45744 366.6513 367.6565 117
P53375 N(6)-Monobutyryladenosine 337.1396 338.1472 117
P53643 662.1493 663.1566 117
P54509 n2-Acetyl,n6-methyllysine 202.1324 203.1390 117
P04587 Methionyl-Glutamate 278.0937 279.1010 116
P13464 Tripterygiumine T 693.2310 694.2329 116
P17580 Swietenidin B 205.0721 206.0796 116
P22655 Candoxatrilat 399.2293 400.2366 116
P25819 Thonzylamine 286.1743 287.1822 116

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 2,601
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 2,572
Glyma.05G224700 hypothetical protein NA 2,568
Glyma.14G201600 hypothetical protein NA 2,551
Glyma.14G201700 hypothetical protein NA 2,549
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 2,512
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 2,473
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2,457
Glyma.13G134300 hypothetical protein NA 2,455
Glyma.08G122200 hypothetical protein NA 2,451