Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32267 Doronine 459.1717 460.1801 117
P34358 Genistein 7-O-glucuronide 446.0862 447.0907 117
P36094 Meehanine H 825.4180 826.4273 117
P36808 Decarbamoylgonyautoxin III 352.0799 353.0857 117
P39528 498.7220 499.7296 117
P41207 Volasertib 618.4025 619.4131 117
P41909 97.5037 98.5109 117
P41950 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1854 581.3797 117
P42108 alpha-Curcumene 202.1704 405.3482 117
P42124 987.5181 988.5281 117

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 2,601
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 2,572
Glyma.05G224700 hypothetical protein NA 2,568
Glyma.14G201600 hypothetical protein NA 2,551
Glyma.14G201700 hypothetical protein NA 2,549
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 2,512
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 2,473
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2,457
Glyma.13G134300 hypothetical protein NA 2,455
Glyma.08G122200 hypothetical protein NA 2,451