Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P44143 Spenolimycin 346.1732 347.1809 129
P46495 Maximaisoflavone B 350.1150 351.1216 129
P47071 Chondramide A 646.3320 647.3399 129
P47983 697.4235 698.4278 129
P49645 Halistanol sulfate 688.2600 689.2620 129
P51555 5,7a-Dihydro-1,4,4,7a-tetramethyl-4H-indene 174.1404 175.1465 129
P54771 Inhibitor 50 435.0802 436.0893 129
P00240 Captopril-cysteine disulfide 336.0804 337.0872 128
P06891 2,5-Dimethylfuran 96.0572 97.0644 128
P07278 435.1175 436.1265 128

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 2,601
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 2,572
Glyma.05G224700 hypothetical protein NA 2,568
Glyma.14G201600 hypothetical protein NA 2,551
Glyma.14G201700 hypothetical protein NA 2,549
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 2,512
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 2,473
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2,457
Glyma.13G134300 hypothetical protein NA 2,455
Glyma.08G122200 hypothetical protein NA 2,451