Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P13475 594.1775 595.1805 108
P14241 201.0613 202.0698 108
P14315 Minwanensin 284.1580 285.1661 108
P14914 539.6069 540.6145 108
P17163 3',4'-Dihydroxy-7-methoxy-8-(3-methylbut-2-enyl)-2'''-(1-hydroxy-1-methylethyl)-furano-(4'',5'':6,5)favanone 452.1782 453.1867 108
P17316 Camicinal 424.2651 425.2723 108
P19987 Juncin K 706.3311 707.3423 108
P20676 3,4,7-Trihydroxy-5-methoxy-8-prenylflavan 4-O-(beta-D-xylopyranosyl-(1->6)-beta-D-glucopyranoside) 666.2435 667.2535 108
P21070 Guvacoline 141.0788 142.0851 108
P21615 4-[(E)-2-(7-Heptoxy-4,4-dimethyl-1,1-dioxo-2,3-dihydrothiochromen-6-yl)prop-1-enyl]benzoic acid 484.2258 485.2336 108

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G182000 hypothetical protein NA 219
Glyma.10G172600 hypothetical protein AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein 219
Glyma.06G121000 hypothetical protein NA 217
Glyma.08G330600 hypothetical protein NA 217
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 216
Glyma.20G107700 hypothetical protein AT2G16860:AT2G16860:GCIP-interacting family protein 216
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 215
Glyma.10G081300 hypothetical protein NA 215
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 215
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 214