Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P20196 Quinomycin B0 1112.3986 1113.3990 122
P28062 425.6862 426.6958 122
P30963 372.7183 373.7242 122
P31492 4-[(E)-2-(7-Heptoxy-4,4-dimethyl-1,1-dioxo-2,3-dihydrothiochromen-6-yl)prop-1-enyl]benzoic acid 484.2281 485.2335 122
P32236 14-hydroxy-11Z,17Z-eicosadienoic acid 324.2632 325.2710 122
P36511 Delavirdine 456.1966 457.2036 122
P37714 Sesamol 138.0311 415.1011 122
P39072 chiglitazar 572.2152 573.2187 122
P42247 1096.0138 1097.0197 122
P42729 1-(6Z,9Z,12Z-octadecatrienoyl)-2-(5Z,8Z,11Z,14Z,17Z-eicosapentaenoyl)-glycero-3-phospho-(1'-myo-inositol) 878.4971 879.5067 122

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G182000 hypothetical protein NA 219
Glyma.10G172600 hypothetical protein AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein 219
Glyma.06G121000 hypothetical protein NA 217
Glyma.08G330600 hypothetical protein NA 217
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 216
Glyma.20G107700 hypothetical protein AT2G16860:AT2G16860:GCIP-interacting family protein 216
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 215
Glyma.10G081300 hypothetical protein NA 215
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 215
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 214