Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P55067 6-Galloylglucose 310.1444 311.1521 —
P55071 Met-leu-phe 409.2063 410.2147 —
P55072 2-(1,3-Dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)-N-(4-isopropylphenyl)acetamide 355.1626 356.1697 —
P55078 WF 14865B 367.1860 368.1898 —
P55080 alpha-Carboxyethyl hydroxychroman 222.0903 223.0962 —
P55088 Methylenecyclohexane 96.0927 97.1002 —
P55095 Nicergoline 483.1218 484.1274 —
P55098 3beta-Chloro-5-androsten-17beta-ol 308.1916 309.1988 —
P55107 Rosmarinine-2-acetate 395.1936 396.2015 —
P55125 2,4-Dimethyl-1-(1-methylethyl)-benzene 148.1239 149.1311 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G135300 hypothetical protein NA 225
Glyma.07G019900 hypothetical protein AT1G79870:AT1G79870:D-isomer specific 2-hydroxyacid dehydrogenase family protein 225
Glyma.18G108400 hypothetical protein NA 225
Glyma.07G069100 hypothetical protein NA 224
Glyma.08G115400 hypothetical protein NA 223
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 222
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 222
Glyma.16G143400 hypothetical protein NA 221
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 221
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease resistance-responsive (dirigent-like protein) family protein 219