Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P02197 Ponticaepoxide 182.0745 183.0824 173
P09241 683.2025 684.2094 173
P12520 L-Leucine-p-nitroanilide 251.1255 252.1347 173
P16284 511.7656 512.7723 173
P20181 (2-Naphthyl)methanol 158.0725 159.0790 173
P22382 Diphenylcarbazide 242.1167 243.1217 173
P26425 Cinnacassiol 842.3264 843.3399 173
P29775 Galangin 5-methyl ether 284.0665 285.0738 173
P36562 Phthalsaurediethylhexylester 306.1814 613.3688 173
P38062 2,2'-Dinor-beta,beta-carotene-3,4,3',4'-tetrone 564.3207 565.3290 173

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.03G135300 hypothetical protein NA 225
Glyma.07G019900 hypothetical protein AT1G79870:AT1G79870:D-isomer specific 2-hydroxyacid dehydrogenase family protein 225
Glyma.18G108400 hypothetical protein NA 225
Glyma.07G069100 hypothetical protein NA 224
Glyma.08G115400 hypothetical protein NA 223
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 222
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 222
Glyma.16G143400 hypothetical protein NA 221
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 221
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease resistance-responsive (dirigent-like protein) family protein 219