Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P26031 Metoprolol 267.1800 268.1874 149
P29319 631.7931 632.7963 149
P29919 1,10-Epoxy-aristolane 220.1810 441.3700 149
P37738 Taxuspine A 728.3220 729.3304 149
P41603 TMC 96 356.1940 357.2010 149
P41889 Labradimil 1097.5501 1098.5538 149
P44481 1-dodecanoyl-2-tetradecanoyl-glycero-3-phospho-(1'-myo-inositol) 726.4307 727.4379 149
P47929 CJ 14877 211.0862 212.0930 149
P48259 1a,1b-dihomo-5,9,11-trihydroxy-6E,14Z-prostadienoic acid-cyclo[8,12] 382.2739 383.2824 149
P49915 (6Z,8Z)-Hexadeca-6,8-dienedioylcarnitine 425.2704 426.2768 149

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G118500 hypothetical protein NA 232
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 232
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 232
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 231
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 229
Glyma.19G102000 ICE2 AT3G26744:ICE1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 229
Glyma.19G102200 hypothetical protein AT2G31410:AT2G31410:coiled-coil protein 229
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 228
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 227
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 226