Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P32267 Doronine 459.1717 460.1801 117
P34358 Genistein 7-O-glucuronide 446.0862 447.0907 117
P36094 Meehanine H 825.4180 826.4273 117
P36808 Decarbamoylgonyautoxin III 352.0799 353.0857 117
P39528 498.7220 499.7296 117
P41207 Volasertib 618.4025 619.4131 117
P41909 97.5037 98.5109 117
P41950 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1854 581.3797 117
P42108 alpha-Curcumene 202.1704 405.3482 117
P42124 987.5181 988.5281 117

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.08G118500 hypothetical protein NA 232
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 232
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 232
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 231
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 229
Glyma.19G102000 ICE2 AT3G26744:ICE1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 229
Glyma.19G102200 hypothetical protein AT2G31410:AT2G31410:coiled-coil protein 229
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 228
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 227
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 226