Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54904 607.0573 608.0659 —
P54906 332.5783 333.5864 —
P54910 (9aS)-6S-(deca-1,3E-dienyl)-4S-methyloctahydro-1H-quinolizin-3R-ol 305.2694 306.2761 —
P54914 Nicarbazin 302.0662 303.0742 —
P54915 (7E)-(1R,3R)-26,26,26,27,27,27-hexafluoro-19-nor-9,10-seco-5,7,16-cholestatrien-23-yne-1,3,25-triol 506.2257 507.2300 —
P54918 Edulirin B 644.2654 645.2746 —
P54922 LysoPC(6:0/0:0) 355.1756 356.1834 —
P54923 275.9093 276.9181 —
P54926 527.1414 528.1520 —
P54927 N-Arachidonoyl Methionine 435.2849 436.2921 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U044200 hypothetical protein AT2G44300:AT2G44300:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.U044300 hypothetical protein AT2G44300:AT2G44300:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.U044400 hypothetical protein NA 0
Glyma.U044500 hypothetical protein NA 0
Glyma.U044600 hypothetical protein NA 0
Glyma.U044700 hypothetical protein AT2G44300:AT2G44300:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 0
Glyma.U044800 hypothetical protein NA 0
Glyma.U044900 hypothetical protein NA 0
Glyma.U045000 hypothetical protein NA 0
Glyma.U045100 hypothetical protein NA 0