Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P28044 5-Methoxy-3,4-methylenedioxyamphetamine 209.1050 210.1126 101
P28859 PA(10:0/13:0) 522.3332 523.3436 101
P32680 alpha-Curcumene 202.1708 203.1778 101
P33822 Madecassoside 974.5082 975.5130 101
P34624 Acanjaposide B 924.4658 925.4766 101
P35821 [(2R,3S,4R,5R,6R)-2-(Hydroxymethyl)-4,5-bis[[(3R)-3-hydroxytetradecanoyl]amino]-6-phosphonooxyoxan-3-yl] dihydrogen phosphate 790.4092 791.4169 101
P35972 Pentenylbenzene 146.1083 147.1156 101
P36043 300.2014 301.2113 101
P38775 Sandrosaponin I 1022.4795 1023.4868 101
P40084 Holarosine A 517.3346 518.3415 101

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U043200 hypothetical protein NA 0
Glyma.U043300 hypothetical protein NA 0
Glyma.U043400 hypothetical protein AT1G12600:AT1G12600:UDP-N-acetylglucosamine (UAA) transporter family 0
Glyma.U043500 hypothetical protein NA 0
Glyma.U043600 hypothetical protein NA 0
Glyma.U043700 hypothetical protein NA 0
Glyma.U043800 hypothetical protein NA 0
Glyma.U043900 hypothetical protein NA 0
Glyma.U044000 hypothetical protein NA 0
Glyma.U044100 hypothetical protein NA 0