Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P30331 15-Deoxyoxalicine A 487.2425 488.2483 109
P31865 Calcitriol phosphate 508.2604 1017.5252 109
P32158 Xanthoxoline 271.0806 272.0878 109
P32569 255.0595 256.0668 109
P37474 (22R)-3beta,14,25-trihydroxy-6-oxo-5beta-cholest-7-en-22-yl dihydrogen phosphate 528.2870 529.2956 109
P39167 366.7223 734.4538 109
P39835 Contorine 533.2343 534.2405 109
P40908 AzII 1098.5226 1099.5310 109
P41520 470.7493 471.7556 109
P41617 Hexahomomethionine 233.1468 234.1546 109

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U043200 hypothetical protein NA 0
Glyma.U043300 hypothetical protein NA 0
Glyma.U043400 hypothetical protein AT1G12600:AT1G12600:UDP-N-acetylglucosamine (UAA) transporter family 0
Glyma.U043500 hypothetical protein NA 0
Glyma.U043600 hypothetical protein NA 0
Glyma.U043700 hypothetical protein NA 0
Glyma.U043800 hypothetical protein NA 0
Glyma.U043900 hypothetical protein NA 0
Glyma.U044000 hypothetical protein NA 0
Glyma.U044100 hypothetical protein NA 0