Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P25734 Potassium glycerophosphate 200.0452 201.0523 120
P25974 788.2214 789.2244 120
P26912 6,8-nonadienal 138.1036 139.1103 120
P29898 SCH 42282 780.4610 781.4670 120
P31333 222.1933 223.1996 120
P34206 958.3426 959.3560 120
P40857 5beta,6beta:22R,26-diepoxyergosta-4beta,19,27-trihydroxy-24-ene-1,26-dione 3beta-sulphate 584.2307 585.2391 120
P42445 4-Amino-3-hydroxybutanoylcarnitine 262.1545 263.1625 120
P42713 5-(3',4',5'-Trihydroxyphenyl)-gamma-valerolactone 224.0681 225.0741 120
P42727 Methyl syramuraldehydate 242.0783 243.0848 120

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U042200 hypothetical protein NA 0
Glyma.U042300 hypothetical protein AT3G08910:AT3G08910:DNAJ heat shock family protein 0
Glyma.U042400 hypothetical protein NA 0
Glyma.U042500 hypothetical protein NA 0
Glyma.U042600 hypothetical protein NA 0
Glyma.U042700 hypothetical protein NA 0
Glyma.U042800 hypothetical protein NA 0
Glyma.U042900 hypothetical protein NA 0
Glyma.U043000 hypothetical protein NA 0
Glyma.U043100 hypothetical protein NA 0