Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54104 3-Deoxyestrone 254.1632 255.1704 —
P54106 432.7419 433.7480 —
P54111 9R-hydroxy-2E,4E-decadienoic acid 184.1093 185.1159 —
P54112 352.8207 353.8284 —
P54114 180.9669 181.9745 —
P54116 356.8340 357.8414 —
P54117 Chlovalicin 332.1393 333.1472 —
P54119 Litsenolide C1 310.2467 311.2532 —
P54121 6-O-Glc-paromamine 485.2244 486.2324 —
P54125 Agrimol F 640.2606 641.2687 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U041200 hypothetical protein NA 0
Glyma.U041300 hypothetical protein NA 0
Glyma.U041400 hypothetical protein NA 0
Glyma.U041500 hypothetical protein NA 0
Glyma.U041600 hypothetical protein NA 0
Glyma.U041700 hypothetical protein AT1G04040:AT1G04040:HAD superfamily, subfamily IIIB acid phosphatase 0
Glyma.U041800 hypothetical protein NA 0
Glyma.U041900 hypothetical protein NA 0
Glyma.U042000 hypothetical protein AT2G29200:PUM1:pumilio 1 0
Glyma.U042100 hypothetical protein NA 0