Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54001 Dictyosphaerin 346.2478 347.2566 —
P54009 372.7716 373.7785 —
P54010 1-eicosyl-glycero-3-phospho-(1'-sn-glycerol) 526.3629 527.3730 —
P54015 291.9254 292.9336 —
P54019 231.9046 232.9106 —
P54020 276.9004 277.9083 —
P54023 6'-O-alpha-D-Xylopyranosylalangiside 637.2289 638.2380 —
P54024 9-Hexadecenoylcholine 339.3160 340.3232 —
P54028 16-Oxosteroid 290.2223 291.2296 —
P54033 Phosphoramide mustard 219.9978 221.0045 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U041200 hypothetical protein NA 0
Glyma.U041300 hypothetical protein NA 0
Glyma.U041400 hypothetical protein NA 0
Glyma.U041500 hypothetical protein NA 0
Glyma.U041600 hypothetical protein NA 0
Glyma.U041700 hypothetical protein AT1G04040:AT1G04040:HAD superfamily, subfamily IIIB acid phosphatase 0
Glyma.U041800 hypothetical protein NA 0
Glyma.U041900 hypothetical protein NA 0
Glyma.U042000 hypothetical protein AT2G29200:PUM1:pumilio 1 0
Glyma.U042100 hypothetical protein NA 0