Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P41800 Phlegmariurine C 520.3342 521.3434 97
P42023 Karavoate R 672.4183 673.4257 97
P45194 Pyranoamentoflavone 604.1317 605.1408 97
P46734 Antibiotic KO 8119B 547.2613 548.2689 97
P49873 Stemaphylline 279.2251 280.2331 97
P01095 Capillaridin A 352.1111 353.1192 96
P01368 Ornaline 262.1167 263.1229 96
P03834 120.0280 121.0359 96
P04085 Gefitinib 446.1502 447.1548 96
P04159 Tiotropium 391.0871 392.0932 96

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U041200 hypothetical protein NA 0
Glyma.U041300 hypothetical protein NA 0
Glyma.U041400 hypothetical protein NA 0
Glyma.U041500 hypothetical protein NA 0
Glyma.U041600 hypothetical protein NA 0
Glyma.U041700 hypothetical protein AT1G04040:AT1G04040:HAD superfamily, subfamily IIIB acid phosphatase 0
Glyma.U041800 hypothetical protein NA 0
Glyma.U041900 hypothetical protein NA 0
Glyma.U042000 hypothetical protein AT2G29200:PUM1:pumilio 1 0
Glyma.U042100 hypothetical protein NA 0