Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P52734 Bialaphos 323.1245 324.1307 101
P01015 Oxaburimamide 214.0929 215.1009 100
P01041 482.0337 483.0418 100
P02048 L-Glutamyl 5-phosphate 227.0189 228.0268 100
P04048 4-Nitroquinoline N-oxide 190.0393 191.0467 100
P04164 Elinafide 520.2115 521.2193 100
P08546 169.0440 170.0507 100
P09036 Delmadinone 360.1485 361.1545 100
P09294 2-Methoxybenzoic acid 152.0462 153.0536 100
P10487 Quercetin 3-(6'''-sinapylglucosyl)(1->2)-galactoside 832.2090 833.2224 100

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U041200 hypothetical protein NA 0
Glyma.U041300 hypothetical protein NA 0
Glyma.U041400 hypothetical protein NA 0
Glyma.U041500 hypothetical protein NA 0
Glyma.U041600 hypothetical protein NA 0
Glyma.U041700 hypothetical protein AT1G04040:AT1G04040:HAD superfamily, subfamily IIIB acid phosphatase 0
Glyma.U041800 hypothetical protein NA 0
Glyma.U041900 hypothetical protein NA 0
Glyma.U042000 hypothetical protein AT2G29200:PUM1:pumilio 1 0
Glyma.U042100 hypothetical protein NA 0