Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54500 126.9627 127.9698 —
P54501 MITOGUAZONE 184.1167 185.1244 —
P54506 140.9526 141.9586 —
P54513 123.1119 124.1188 —
P54520 308.8758 309.8808 —
P54526 Lucidusculine 401.2586 402.2660 —
P54527 Taurocholic acid 3-sulfate 595.2481 596.2540 —
P54532 PE-NMe2(11D3/9D3) 823.5404 824.5486 —
P54534 Sulfur mustard 157.9693 158.9769 —
P54538 Cadalene 198.1403 199.1475 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U040200 hypothetical protein AT5G01580:OSH1:gamma interferon responsive lysosomal thiol (GILT) reductase family protein 0
Glyma.U040300 hypothetical protein NA 0
Glyma.U040400 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.U040500 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.U040600 hypothetical protein AT4G39830:AT4G39830:Cupredoxin superfamily protein 0
Glyma.U040700 hypothetical protein NA 0
Glyma.U040800 hypothetical protein NA 0
Glyma.U040900 hypothetical protein NA 0
Glyma.U041000 hypothetical protein NA 0
Glyma.U041100 hypothetical protein NA 0