Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54201 L-AMP 607.0368 608.0481 —
P54202 606.9985 608.0043 —
P54204 546.4234 547.4322 —
P54214 605.8717 606.8775 —
P54216 603.1511 604.1590 —
P54217 605.9906 606.9970 —
P54218 2,7-Dideacetyltaxuspine X 682.2949 683.3035 —
P54219 1-(2-methoxy-19Z-hexacosaenyl)-sn-glycero-3-phosphoethanolamine 607.4656 608.4712 —
P54220 Bazzanin O 605.9807 606.9835 —
P54226 280.8923 281.8989 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U040200 hypothetical protein AT5G01580:OSH1:gamma interferon responsive lysosomal thiol (GILT) reductase family protein 0
Glyma.U040300 hypothetical protein NA 0
Glyma.U040400 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.U040500 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.U040600 hypothetical protein AT4G39830:AT4G39830:Cupredoxin superfamily protein 0
Glyma.U040700 hypothetical protein NA 0
Glyma.U040800 hypothetical protein NA 0
Glyma.U040900 hypothetical protein NA 0
Glyma.U041000 hypothetical protein NA 0
Glyma.U041100 hypothetical protein NA 0