Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P54066 231.9007 232.9062 —
P54068 539.3786 540.3864 —
P54069 407.3627 408.3673 —
P54070 355.8295 356.8375 —
P54072 Eupaformosanin 420.1790 421.1892 —
P54076 350.8240 351.8319 —
P54077 Gentirigenic acid 522.3529 523.3603 —
P54079 259.8988 260.9058 —
P54081 DG(10:0/a-13:0/0:0) 442.3651 443.3729 —
P54083 6-(Dipropylamino)-5,6,7,8-tetrahydronaphthalene-1,2-diol 263.1935 264.2013 —

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U040200 hypothetical protein AT5G01580:OSH1:gamma interferon responsive lysosomal thiol (GILT) reductase family protein 0
Glyma.U040300 hypothetical protein NA 0
Glyma.U040400 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.U040500 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.U040600 hypothetical protein AT4G39830:AT4G39830:Cupredoxin superfamily protein 0
Glyma.U040700 hypothetical protein NA 0
Glyma.U040800 hypothetical protein NA 0
Glyma.U040900 hypothetical protein NA 0
Glyma.U041000 hypothetical protein NA 0
Glyma.U041100 hypothetical protein NA 0