Soybean mGWAS DB

Explore metabolite–gene associations from soybean metabolome GWAS results. This database supports bidirectional navigation between metabolites and genes, with linked detail pages for association evidence and mass-based compound candidates.

How to explore the database →

SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Explore by Metabolite

Search metabolites by metabolite ID or candidate names, formulas or compound IDs.

Metabolite ID Candidate annotation Deionized mass (Da) Average m/z Associated genes (overlap)
P51855 195.9643 196.9712 103
P52029 Bazzanin J 492.0857 493.0969 103
P53389 339.1392 340.1463 103
P03812 Safflomin C 614.1655 615.1726 102
P04092 288.5715 289.5791 102
P05304 desmethyladinazolam 323.0930 324.0985 102
P08896 4-Deoxypyridoxine 153.0769 154.0842 102
P09553 Zafirlukast metabolite M5 591.2125 592.2161 102
P10251 Decarbamoylgonyautoxin 1 368.0727 369.0791 102
P13485 Pharacine 440.1444 441.1519 102

Explore by Gene

Search genes by gene ID, alias, description, or Arabidopsis ortholog information.

Gene ID Alias Description Arabidopsis ortholog Associated metabolites (overlap)
Glyma.U040200 hypothetical protein AT5G01580:OSH1:gamma interferon responsive lysosomal thiol (GILT) reductase family protein 0
Glyma.U040300 hypothetical protein NA 0
Glyma.U040400 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.U040500 hypothetical protein AT3G56060:AT3G56060:Glucose-methanol-choline (GMC) oxidoreductase family protein 0
Glyma.U040600 hypothetical protein AT4G39830:AT4G39830:Cupredoxin superfamily protein 0
Glyma.U040700 hypothetical protein NA 0
Glyma.U040800 hypothetical protein NA 0
Glyma.U040900 hypothetical protein NA 0
Glyma.U041000 hypothetical protein NA 0
Glyma.U041100 hypothetical protein NA 0