Soybean mGWAS DB
Explore metabolite–gene associations from soybean metabolome GWAS results.
This database supports bidirectional navigation between metabolites and genes,
with linked detail pages for association evidence and mass-based compound candidates.
SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.
Explore by Metabolite
Search metabolites by metabolite ID or candidate names, formulas or compound IDs.
| Metabolite ID | Candidate annotation | Deionized mass (Da) | Average m/z | Associated genes (overlap) |
|---|---|---|---|---|
| P30331 | 15-Deoxyoxalicine A | 487.2425 | 488.2483 | 109 |
| P31865 | Calcitriol phosphate | 508.2604 | 1017.5252 | 109 |
| P32158 | Xanthoxoline | 271.0806 | 272.0878 | 109 |
| P32569 | 255.0595 | 256.0668 | 109 | |
| P37474 | (22R)-3beta,14,25-trihydroxy-6-oxo-5beta-cholest-7-en-22-yl dihydrogen phosphate | 528.2870 | 529.2956 | 109 |
| P39167 | 366.7223 | 734.4538 | 109 | |
| P39835 | Contorine | 533.2343 | 534.2405 | 109 |
| P40908 | AzII | 1098.5226 | 1099.5310 | 109 |
| P41520 | 470.7493 | 471.7556 | 109 | |
| P41617 | Hexahomomethionine | 233.1468 | 234.1546 | 109 |
Explore by Gene
Search genes by gene ID, alias, description, or Arabidopsis ortholog information.
| Gene ID | Alias | Description | Arabidopsis ortholog | Associated metabolites (overlap) |
|---|---|---|---|---|
| Glyma.16G140000 | hypothetical protein | AT5G01820:SR1:serine/threonine protein kinase 1 | 238 | |
| Glyma.12G183700 | hypothetical protein | AT2G27600:SKD1:AAA-type ATPase family protein | 237 | |
| Glyma.20G112900 | hypothetical protein | AT2G39210:AT2G39210:Major facilitator superfamily protein | 236 | |
| Glyma.03G022900 | hypothetical protein | NA | 235 | |
| Glyma.19G119100 | hypothetical protein | AT3G03650:EDA5:Exostosin family protein | 235 | |
| Glyma.08G147300 | hypothetical protein | NA | 233 | |
| Glyma.12G212300 | hypothetical protein | AT3G58710:WRKY69:WRKY DNA-binding protein 69 | 233 | |
| Glyma.16G219700 | hypothetical protein | NA | 233 | |
| Glyma.04G237000 | hypothetical protein | AT1G31910:AT1G31910:GHMP kinase family protein | 232 | |
| Glyma.04G237200 | hypothetical protein | AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 232 |